"A fully integrated multiplatform image analysis utility"
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A. Installing Other Software
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bioimagesuite_manual
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27. Command Line/Batch Mode
Contents
9 Appendices
Subsections
A. Installing Other Software
A.1 Installing and Configuring FSL
A.2 Installing the WFU Pick Atlas
B. Compiling BioImage Suite
B.1 Overview
B.2 Compiling BioImage Suite
Notes
Steps
B.3 Compiling the Prerequisites
B.3.1 The vtk44_yale distribution
Tcl/Tk and Extensions
Incr Tcl (3.2.1)
Iwidgets 4.0.1
Tcllib - 1.8
VTK 4.4
CLAPACK
Config Files
B.3.2 The itk241_yale distribution
ITK 2.4.1
B.3.3 The bioimagesuite_extra distribution
Xercesc
Minc2, Netcdf 3.6.1, HDF5 1.6.5
B.4 Miscellaneous
C. Bioimagesuite FAQ
C.1 Working with DICOM data
C.2 How to install BIS on Debian
C.3 Working with TIFF images
C.4 How can I obtain Bioimagesuite?
C.5 Is there any documentation for Bioimagesuite?
C.6 How do I convert matlab format (.mat) into .hdr ?
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